{
  "@context": {
    "@vocab": "https://schema.org/",
    "biolink": "https://w3id.org/biolink/",
    "orion": "https://github.com/RobokopU24/ORION"
  },
  "@id": "https://kgx-storage.ci.transltr.io/releases/string/2026_06_17/",
  "@type": "Dataset",
  "name": "string",
  "description": "A knowledge graph built for the NCATS Biomedical Data Translator project using Translator-Ingests, Biolink Model, and Node Normalizer.",
  "license": "MIT",
  "url": "https://kgx-storage.ci.transltr.io/releases/string/2026_06_17/",
  "version": "string_v12.0_aa147888_2025sep1_2.4.1_1.4.0_conflated_strict_2.0.0_4.4.2",
  "dateCreated": "2026_06_17",
  "dateModified": "",
  "keywords": [],
  "creator": [],
  "contactPoint": [],
  "funder": [],
  "conformsTo": [],
  "schema": {
    "nodes": [
      {
        "category": [
          "biolink:Protein"
        ],
        "count": 20548,
        "id_prefixes": {
          "UniProtKB": 20488,
          "ENSEMBL": 60
        },
        "attributes": {
          "equivalent_identifiers": 20548,
          "in_taxon": 20548,
          "name": 20548,
          "information_content": 14401,
          "description": 14401
        }
      },
      {
        "category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "count": 35766,
        "id_prefixes": {
          "NCBIGene": 35766
        },
        "attributes": {
          "equivalent_identifiers": 35766,
          "in_taxon": 35766,
          "name": 35766,
          "description": 35766,
          "information_content": 21109
        }
      }
    ],
    "nodes_summary": {
      "total_count": 56314,
      "id_prefixes": {
        "NCBIGene": 35766,
        "UniProtKB": 20488,
        "ENSEMBL": 60
      },
      "attributes": {
        "equivalent_identifiers": 56314,
        "in_taxon": 56314,
        "name": 56314,
        "description": 50167,
        "information_content": 35510
      }
    },
    "edges": [
      {
        "subject_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "predicate": "biolink:interacts_with",
        "object_category": [
          "biolink:Protein"
        ],
        "count": 20792,
        "primary_knowledge_sources": {
          "infores:string": 20792
        },
        "qualifiers": {},
        "attributes": {
          "id": 20792,
          "category": 20792,
          "knowledge_level": 20792,
          "agent_type": 20792,
          "original_subject": 20792,
          "original_object": 20792
        },
        "subject_id_prefixes": {
          "NCBIGene": 20792
        },
        "object_id_prefixes": {
          "UniProtKB": 20742,
          "ENSEMBL": 50
        }
      },
      {
        "subject_category": [
          "biolink:Protein"
        ],
        "predicate": "biolink:physically_interacts_with",
        "object_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "count": 273161,
        "primary_knowledge_sources": {
          "infores:string": 273161
        },
        "qualifiers": {},
        "attributes": {
          "id": 273161,
          "category": 273161,
          "has_attribute": 273161,
          "knowledge_level": 273161,
          "agent_type": 273161,
          "original_subject": 273161,
          "original_object": 273161
        },
        "subject_id_prefixes": {
          "UniProtKB": 272803,
          "ENSEMBL": 358
        },
        "object_id_prefixes": {
          "NCBIGene": 273161
        }
      },
      {
        "subject_category": [
          "biolink:Protein"
        ],
        "predicate": "biolink:physically_interacts_with",
        "object_category": [
          "biolink:Protein"
        ],
        "count": 252871,
        "primary_knowledge_sources": {
          "infores:string": 252871
        },
        "qualifiers": {},
        "attributes": {
          "id": 252871,
          "category": 252871,
          "has_attribute": 252871,
          "knowledge_level": 252871,
          "agent_type": 252871,
          "original_subject": 252871,
          "original_object": 252871
        },
        "subject_id_prefixes": {
          "UniProtKB": 252525,
          "ENSEMBL": 346
        },
        "object_id_prefixes": {
          "UniProtKB": 252162,
          "ENSEMBL": 709
        }
      },
      {
        "subject_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "predicate": "biolink:physically_interacts_with",
        "object_category": [
          "biolink:Protein"
        ],
        "count": 326499,
        "primary_knowledge_sources": {
          "infores:string": 326499
        },
        "qualifiers": {},
        "attributes": {
          "id": 326499,
          "category": 326499,
          "has_attribute": 326499,
          "knowledge_level": 326499,
          "agent_type": 326499,
          "original_subject": 326499,
          "original_object": 326499
        },
        "subject_id_prefixes": {
          "NCBIGene": 326499
        },
        "object_id_prefixes": {
          "UniProtKB": 325722,
          "ENSEMBL": 777
        }
      },
      {
        "subject_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "predicate": "biolink:physically_interacts_with",
        "object_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "count": 558206,
        "primary_knowledge_sources": {
          "infores:string": 558206
        },
        "qualifiers": {},
        "attributes": {
          "id": 558206,
          "category": 558206,
          "has_attribute": 558206,
          "knowledge_level": 558206,
          "agent_type": 558206,
          "original_subject": 558206,
          "original_object": 558206
        },
        "subject_id_prefixes": {
          "NCBIGene": 558206
        },
        "object_id_prefixes": {
          "NCBIGene": 558206
        }
      },
      {
        "subject_category": [
          "biolink:Protein"
        ],
        "predicate": "biolink:interacts_with",
        "object_category": [
          "biolink:Protein"
        ],
        "count": 22309,
        "primary_knowledge_sources": {
          "infores:string": 22309
        },
        "qualifiers": {},
        "attributes": {
          "id": 22309,
          "category": 22309,
          "knowledge_level": 22309,
          "agent_type": 22309,
          "original_subject": 22309,
          "original_object": 22309
        },
        "subject_id_prefixes": {
          "UniProtKB": 22277,
          "ENSEMBL": 32
        },
        "object_id_prefixes": {
          "UniProtKB": 22240,
          "ENSEMBL": 69
        }
      },
      {
        "subject_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "predicate": "biolink:interacts_with",
        "object_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "count": 28937,
        "primary_knowledge_sources": {
          "infores:string": 28937
        },
        "qualifiers": {},
        "attributes": {
          "id": 28937,
          "category": 28937,
          "knowledge_level": 28937,
          "agent_type": 28937,
          "original_subject": 28937,
          "original_object": 28937
        },
        "subject_id_prefixes": {
          "NCBIGene": 28937
        },
        "object_id_prefixes": {
          "NCBIGene": 28937
        }
      },
      {
        "subject_category": [
          "biolink:Protein"
        ],
        "predicate": "biolink:interacts_with",
        "object_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "count": 17591,
        "primary_knowledge_sources": {
          "infores:string": 17591
        },
        "qualifiers": {},
        "attributes": {
          "id": 17591,
          "category": 17591,
          "knowledge_level": 17591,
          "agent_type": 17591,
          "original_subject": 17591,
          "original_object": 17591
        },
        "subject_id_prefixes": {
          "UniProtKB": 17569,
          "ENSEMBL": 22
        },
        "object_id_prefixes": {
          "NCBIGene": 17591
        }
      },
      {
        "subject_category": [
          "biolink:Protein"
        ],
        "predicate": "biolink:coexpressed_with",
        "object_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "count": 1236,
        "primary_knowledge_sources": {
          "infores:string": 1236
        },
        "qualifiers": {},
        "attributes": {
          "id": 1236,
          "category": 1236,
          "knowledge_level": 1236,
          "agent_type": 1236,
          "original_subject": 1236,
          "original_object": 1236
        },
        "subject_id_prefixes": {
          "UniProtKB": 1236
        },
        "object_id_prefixes": {
          "NCBIGene": 1236
        }
      },
      {
        "subject_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "predicate": "biolink:coexpressed_with",
        "object_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "count": 5694,
        "primary_knowledge_sources": {
          "infores:string": 5694
        },
        "qualifiers": {},
        "attributes": {
          "id": 5694,
          "category": 5694,
          "knowledge_level": 5694,
          "agent_type": 5694,
          "original_subject": 5694,
          "original_object": 5694
        },
        "subject_id_prefixes": {
          "NCBIGene": 5694
        },
        "object_id_prefixes": {
          "NCBIGene": 5694
        }
      },
      {
        "subject_category": [
          "biolink:Protein"
        ],
        "predicate": "biolink:coexpressed_with",
        "object_category": [
          "biolink:Protein"
        ],
        "count": 1408,
        "primary_knowledge_sources": {
          "infores:string": 1408
        },
        "qualifiers": {},
        "attributes": {
          "id": 1408,
          "category": 1408,
          "knowledge_level": 1408,
          "agent_type": 1408,
          "original_subject": 1408,
          "original_object": 1408
        },
        "subject_id_prefixes": {
          "UniProtKB": 1408
        },
        "object_id_prefixes": {
          "UniProtKB": 1408
        }
      },
      {
        "subject_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "predicate": "biolink:coexpressed_with",
        "object_category": [
          "biolink:Protein"
        ],
        "count": 1564,
        "primary_knowledge_sources": {
          "infores:string": 1564
        },
        "qualifiers": {},
        "attributes": {
          "id": 1564,
          "category": 1564,
          "knowledge_level": 1564,
          "agent_type": 1564,
          "original_subject": 1564,
          "original_object": 1564
        },
        "subject_id_prefixes": {
          "NCBIGene": 1564
        },
        "object_id_prefixes": {
          "UniProtKB": 1563,
          "ENSEMBL": 1
        }
      },
      {
        "subject_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "predicate": "biolink:gene_fusion_with",
        "object_category": [
          "biolink:Protein"
        ],
        "count": 170,
        "primary_knowledge_sources": {
          "infores:string": 170
        },
        "qualifiers": {},
        "attributes": {
          "id": 170,
          "category": 170,
          "has_attribute": 170,
          "knowledge_level": 170,
          "agent_type": 170,
          "original_subject": 170,
          "original_object": 170
        },
        "subject_id_prefixes": {
          "NCBIGene": 170
        },
        "object_id_prefixes": {
          "UniProtKB": 169,
          "ENSEMBL": 1
        }
      },
      {
        "subject_category": [
          "biolink:Protein"
        ],
        "predicate": "biolink:gene_fusion_with",
        "object_category": [
          "biolink:Protein"
        ],
        "count": 153,
        "primary_knowledge_sources": {
          "infores:string": 153
        },
        "qualifiers": {},
        "attributes": {
          "id": 153,
          "category": 153,
          "has_attribute": 153,
          "knowledge_level": 153,
          "agent_type": 153,
          "original_subject": 153,
          "original_object": 153
        },
        "subject_id_prefixes": {
          "UniProtKB": 153
        },
        "object_id_prefixes": {
          "UniProtKB": 152,
          "ENSEMBL": 1
        }
      },
      {
        "subject_category": [
          "biolink:Protein"
        ],
        "predicate": "biolink:gene_fusion_with",
        "object_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "count": 142,
        "primary_knowledge_sources": {
          "infores:string": 142
        },
        "qualifiers": {},
        "attributes": {
          "id": 142,
          "category": 142,
          "has_attribute": 142,
          "knowledge_level": 142,
          "agent_type": 142,
          "original_subject": 142,
          "original_object": 142
        },
        "subject_id_prefixes": {
          "UniProtKB": 142
        },
        "object_id_prefixes": {
          "NCBIGene": 142
        }
      },
      {
        "subject_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "predicate": "biolink:gene_fusion_with",
        "object_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "count": 267,
        "primary_knowledge_sources": {
          "infores:string": 267
        },
        "qualifiers": {},
        "attributes": {
          "id": 267,
          "category": 267,
          "has_attribute": 267,
          "knowledge_level": 267,
          "agent_type": 267,
          "original_subject": 267,
          "original_object": 267
        },
        "subject_id_prefixes": {
          "NCBIGene": 267
        },
        "object_id_prefixes": {
          "NCBIGene": 267
        }
      }
    ],
    "edges_summary": {
      "total_count": 1511000,
      "predicates": {
        "biolink:physically_interacts_with": 1410737,
        "biolink:interacts_with": 89629,
        "biolink:coexpressed_with": 9902,
        "biolink:gene_fusion_with": 732
      },
      "primary_knowledge_sources": {
        "infores:string": 1511000
      },
      "predicates_by_knowledge_source": {
        "infores:string": {
          "biolink:physically_interacts_with": 1410737,
          "biolink:interacts_with": 89629,
          "biolink:coexpressed_with": 9902,
          "biolink:gene_fusion_with": 732
        }
      },
      "qualifiers": {},
      "attributes": {
        "id": 1511000,
        "category": 1511000,
        "knowledge_level": 1511000,
        "agent_type": 1511000,
        "original_subject": 1511000,
        "original_object": 1511000,
        "has_attribute": 1411469
      }
    }
  },
  "biolinkVersion": "4.4.2",
  "babelVersion": "2025sep1",
  "distribution": [],
  "hasPart": [],
  "isBasedOn": [
    {
      "@type": "Dataset",
      "identifier": "string",
      "name": "STRING Reference Ingest Guide",
      "description": "STRING (Search Tool for the Retrieval of Interacting Genes/Proteins) is a database of known and predicted protein\u2013protein interactions hosted by SIB / EMBL / CPR. STRING aggregates evidence from seven channels \u2014 genomic neighborhood, gene fusion, phylogenetic co-occurrence, homology, co-expression, experiments, and text mining \u2014 plus curated databases, and combines them into a single ``combined_score`` per interaction pair.\n(STITCH, STRING's sister database for protein\u2013chemical interactions, was developed alongside this ingest but split out for a later, properly-scoped effort \u2014 preserved on the ``stitch-ingest`` branch. See CHANGELOG 2026-05-28.)",
      "license": {
        "terms_of_use_url": "https://string-db.org/cgi/access",
        "terms_of_use_description": "STRING data is released under the Creative Commons Attribution 4.0 International License (CC BY 4.0).",
        "license_name": "CC BY 4.0",
        "license_url": "https://creativecommons.org/licenses/by/4.0/"
      },
      "url": [
        {
          "STRING downloads": "https://stringdb-downloads.org/"
        },
        {
          "STRING main site": "https://string-db.org/"
        }
      ],
      "version": "v12.0"
    }
  ]
}